PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_32784-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 240aa    MW: 26275.1 Da    PI: 6.1422
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_32784-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH23.88.1e-0874121454
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
              HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      ++  r + RRd++N++f eL + l +    +  K +Ka+iL  A++ + +L
  TRIUR3_32784-P1  74 SKACRGKVRRDKLNDRFLELGTTLDPG---KPVKADKAAILSDATRMVTQL 121
                      66778899******************9...99**************99988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.12270121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.83E-1070138IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.11E-671126No hitNo description
PfamPF000104.7E-575121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.1E-576127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.7E-1179144IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MSLPPTDGGD DWFLDCGILE DLPAAACGAF PWDASVSSSN PSAEVGSHVN KLDLPKDSGS  60
NKRLRSEPCG RPTSKACRGK VRRDKLNDRF LELGTTLDPG KPVKADKAAI LSDATRMVTQ  120
LRAEAQQLKD TNGSLEDKIK ELKAEKDELR DEKQKLKLEK ETLEHQMKLL TATPAYMPHP  180
TMMPSPFAQA PMAPFHAQAQ ALGQKLMMPF VGYPGYPMWQ LMPPSEVDTS KDSEACPPVA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGU3699770.0GU369977.1 Triticum aestivum helix-loop-helix-like protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003573355.11e-149PREDICTED: transcription factor ILR3
SwissprotQ9FH372e-71ILR3_ARATH; Transcription factor ILR3
TrEMBLM8A1471e-177M8A147_TRIUA; Transcription factor ILR3
STRINGMLOC_6315.11e-166(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP20233885
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.16e-58bHLH family protein